HCMV_UL36_HCMV_UL70

HCMV_UL36_HCMV_UL70
Monomer Prediction HCMV_UL36
Monomer Prediction HCMV_UL70

Sequence coverage

pLDDT

Predicted Alignment Error (PAE)


Model rank 1, ipTM = 0.2

 

Model rank 2, ipTM = 0.19

 

Model rank 3, ipTM = 0.18

 

Model rank 4, ipTM = 0.18

 

Model rank 5, ipTM = 0.17

 

Download files:
HCMV_UL36_HCMV_UL70_rank_001.pdb
HCMV_UL36_HCMV_UL70_rank_002.pdb
HCMV_UL36_HCMV_UL70_rank_003.pdb
HCMV_UL36_HCMV_UL70_rank_004.pdb
HCMV_UL36_HCMV_UL70_rank_005.pdb
HCMV_UL36_HCMV_UL70_coverage.png
HCMV_UL36_HCMV_UL70_plddt.png
HCMV_UL36_HCMV_UL70_pae.png

Search for similar structures using Foldseek:




This page uses 3Dmol.js: Molecular visualization with WebGL by Nicholas Rego and David Koes.
Bioinformatics (2015) doi: 10.1093/bioinformatics/btu829

Predictions were run with Colabfold by the Steinegger lab:
Mirdita M, Schütze K, Moriwaki Y, Heo L, Ovchinnikov S, Steinegger M. “ColabFold: Making protein folding accessible to all”.
Nature Methods (2022) doi: 10.1038/s41592-022-01488-1

Foldseek is developed by the Steinegger lab:
van Kempen M, Kim S, Tumescheit C, Mirdita M, Söding J, and Steinegger M. “Foldseek: fast and accurate protein structure search”.
bioRxiv (2022) doi: 10.1101/2022.02.07.479398

Alphafold2 was developed by Deepmind:
Jumper et al. “Highly accurate protein structure prediction with AlphaFold.”
Nature (2021) doi: 10.1038/s41586-021-03819-2

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.