HCMV_RL6

Sequence coverage and plDDT Predicted alignment error (PAE)

Model 1

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Model 2

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Model 3

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Model 4

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Model 5

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Download files:
HCMV_RL6_model_1.pdb
HCMV_RL6_model_2.pdb
HCMV_RL6_model_3.pdb
HCMV_RL6_model_4.pdb
HCMV_RL6_model_5.pdb
HCMV_RL6_coverage_lDDT.png
HCMV_RL6_PAE.png

Search for similar structures using Foldseek:
Foldseek HCMV_RL6_model_1.pdb
Foldseek HCMV_RL6_model_2.pdb
Foldseek HCMV_RL6_model_3.pdb
Foldseek HCMV_RL6_model_4.pdb
Foldseek HCMV_RL6_model_5.pdb

This page uses 3Dmol.js: Molecular visualization with WebGL by Nicholas Rego and David Koes
Bioinformatics (2015) doi: 10.1093/bioinformatics/btu829

Predictions were run with Colabfold by the Steinegger lab:
Mirdita M, Schütze K, Moriwaki Y, Heo L, Ovchinnikov S, Steinegger M. ColabFold: Making protein folding accessible to all.
Nature Methods (2022) doi: 10.1038/s41592-022-01488-1

Foldseek is developed by the by the Steinegger lab:
van Kempen M, Kim S, Tumescheit C, Mirdita M, Söding J, and Steinegger M. Foldseek: fast and accurate protein structure search.
bioRxiv (2022) doi: 10.1101/2022.02.07.479398

Alphafold2 was developed by Deepmind:
Jumper et al. “Highly accurate protein structure prediction with AlphaFold.”
Nature (2021) doi: 10.1038/s41586-021-03819-2